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authIdHal_s : philippe-andrey
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A Statistically Representative Atlas for Mapping Neuronal Circuits in the Drosophila Adult Brain

Ignacio Arganda-Carreras , Tudor Manoliu , Nicolas Mazuras , Florian Schulze , Juan Iglesias , et al.
Frontiers in Neuroinformatics, 2018, 12, pp.13. ⟨10.3389/fninf.2018.00013⟩
Journal articles hal-01828331v1

On the presence and functional significance of sympathetic premotor neurons with collateralized spinal axons in the rat

David G. S. Farmer , Natasha Pracejus , Bowen Dempsey , Anita Turner , Phillip Bokiniec , et al.
The Journal of Physiology, 2019, 597 (13), pp.3407-3423. ⟨10.1113/JP277661⟩
Journal articles hal-02625857v1

Statistical multi-scale atlasing of leaf morphogenesis

Faïçal Selka , Jasmine Burguet , Eric Biot , Thomas T. Blein , Patrick Laufs , et al.
7. International Workshop on Image Analysis Methos for the Plant Sciences 2019 (IAMPSI1́9), Jul 2019, Lyon, France
Conference papers hal-02733992v1
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Nuclear architecture and chromatin dynamics in interphase nuclei of Arabidopsis thaliana

Stefania del Prete , Javier Arpon Diaz-Aldagalan , Kaori Sakai , Philippe Andrey , Valerie Gaudin
Cytogenetic and Genome Research, 2014, 143 (1-3), pp.28-50. ⟨10.1159/000363724⟩
Journal articles hal-01204098v1

Modeling spatial distributions and patterns in biological imaging

Philippe Andrey
Mini-symposium BioImage Informatics, GDR2588. FRA., Nov 2015, Paris, France
Conference papers hal-02795146v1

Designing Image Analysis Pipelines in Light Microscopy: A Rational Approach

Ignacio Arganda Carreras , Philippe Andrey
Light Microscopy, 1563, SPRINGER, pp.23, 2017, Methods in Molecular Biology, 978-1-4939-6810-7; 978-1-4939-6808-4. ⟨10.1007/978-1-4939-6810-7_13⟩
Book sections hal-02788784v1

Statistical modeling of spatial interactions: new insights into the spatial organization of plant heterochromatin

Philippe Andrey
INDEPTH Cost Action Meeting: Impact of Chromatin Domains on Plant Phenotypes, Dec 2019, El Escorial, Spain
Conference papers hal-03776229v1

Modeling 3D cell division patterns in plant early embryogenesis

Philippe Andrey
CLIPS 2017 - Multiscale live imaging in human, animal and plant health, Sep 2017, Gif-sur-Yvette, France
Conference papers hal-02785869v1

Image analysis and computer modelling of cell divisions in plant early embryogenesis

Philippe Andrey
Phycomorph EU Cost Action Workshop: “Imaging seaweed cells and tissues”, Nov 2018, Roscoff, France
Conference papers hal-02785870v1

Towards a spatio-temporal atlas of 3D cellular parameters during leaf morphogenesis

Faïçal Selka , Thomas T. Blein , Jasmine Burguet , Eric Biot , Patrick Laufs , et al.
16. IEEE International Conference on Computer Vision (ICCV 2017), Oct 2017, Venise, Italy. 3212 p., ⟨10.1109/ICCVW.2017.14⟩
Conference papers hal-02737139v1

Strategy and software for the statistical spatial analysis of 3D intracellular distributions

Eric Biot , Elizabeth Crowell Lecouey , Jasmine Burguet-de Curières , Herman Höfte , Samantha Vernhettes , et al.
Plant Journal, 2016, 87 (2), pp.1-13. ⟨10.1111/tpj.13189⟩
Journal articles hal-01533894v1
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Cell geometry determines symmetric and asymmetric division plane selection in Arabidopsis early embryos

Julien Moukhtar , Alain Trubuil , Katia Belcram , David D. Legland , Zhor Khadir , et al.
PLoS Computational Biology, 2019, 15 (2), pp.e1006771. ⟨10.1371/journal.pcbi.1006771⟩
Journal articles hal-02393309v1

Immunohistochemical characterization of a spinal cord generator of ejaculation in human

C. Chehensse , P. Facchinetti , S. Bahrami , Philippe Andrey , J. M. Soler , et al.
Journal of Sexual Medicine, 2017, 14 (1), pp.18-18. ⟨10.1016/j.jsxm.2016.11.041⟩
Journal articles hal-02625067v1

Heterogeneity and its multiscale integration in plant morphogenesis

Léo Serra , Nicolas Arnaud , Faïçal Selka , Catherine Rechenmann , Philippe Andrey , et al.
Current Opinion in Plant Biology, 2018, 46, pp.18-24. ⟨10.1016/j.pbi.2018.07.001⟩
Journal articles hal-02621377v1
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Dopamine Modulates the Processing of Food Odour in the Ventral Striatum

Olivier Rampin , Audrey Saint Albin Deliot , Christian Ouali , Jasmine Burguet , Elisa Gry , et al.
Biomedicines, 2022, 10 (5), pp.1126. ⟨10.3390/biomedicines10051126⟩
Journal articles hal-03738444v1

P186: Différences d’organisation spatiale des neurones pro-opiomélanocortine (POMC) dans le noyau arqué de l’hypothalamus de souris sensibles ou résistantes à l’obésité

M. Soto , M. Guillaumin , J. Burguet , S. Benoit , C. Chaumontet , et al.
12es Journées Francophones de Nutrition, Dec 2014, Bruxelles, Belgium. pp.S165, ⟨10.1016/S0985-0562(14)70828-3⟩
Conference papers hal-01579240v1

Computational approaches to decipher cell division patterns in plant embryo

Philippe Andrey
Plant Computational Biology Workshop, Aug 2022, Lyon, France
Conference papers hal-03776246v1

Edge correction for intensity estimation of 3D heterogeneous point processes from replicated data

J. Burguet , P. Andrey
Spatial Statistics, 2020, 36, pp.100421. ⟨10.1016/j.spasta.2020.100421⟩
Journal articles hal-03160300v1
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A generic classification-based method for segmentation of nuclei in 3D images of early embryos

Jaza Gul-Mohammed , Ignacio Arganda Carreras , Philippe Andrey , Vincent Galy , Thomas Boudier
BMC Bioinformatics, 2014, 15, pp.9. ⟨10.1186/1471-2105-15-9⟩
Journal articles hal-01204103v1

Analyse et modélisation d’organisations spatiales en imagerie biologique

Philippe Andrey
Sciences du Vivant [q-bio]. Université Pierre et Marie Curie - Paris 6, 2015
Habilitation à diriger des recherches tel-02795150v1

Human spinal ejaculation generator

Clément Chéhensse , Patricia Facchinetti , Stéphane Bahrami , Philippe Andrey , Jean-Marc Soler , et al.
Annals of Neurology, 2017, 81 (1), pp.35-45. ⟨10.1002/ana.24819⟩
Journal articles hal-01602656v1

Mapping and comparing spatial distributions in biological imaging

Jasmine Burguet , Philippe Andrey
Quantitative BioImaging Conference, Jan 2019, Rennes, France
Conference papers hal-03780303v1
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FIGL1 and its novel partner FLIP form a conserved complex that regulates homologous recombination

Joiselle Blanche Fernandes , Marine Duhamel , Mathilde Seguéla-Arnaud , Nicole Froger , Chloé Girard , et al.
PLoS Genetics, 2018, 14 (4), pp.e1007317. ⟨10.1371/journal.pgen.1007317⟩
Journal articles hal-02178025v1

NucleusJ: an ImageJ plugin for quantifying 3D images of interphase nuclei

Axel Poulet , Ignacio Arganda-Carreras , David Legland , Aline V. Probst , Philippe Andrey , et al.
Bioinformatics, 2015, 31 (7), pp.1144 - 1146. ⟨10.1093/bioinformatics/btu774⟩
Journal articles hal-01920000v1

Spatial 3D modelling of nuclear architecture: application to A. thaliana leaf cell nuclei

Javier Arpon Diaz-Aldagalan , Kaori Sakai , Stefania del Prete , Valérie Gaudin , Philippe Andrey
Quantitative BioImaging Conference, Jan 2015, Paris, France
Conference papers hal-02795803v1

Deciphering cell division patterns in plant early embryogenesis by combining 3D image analysis and computer modelling

Elise Laruelle , Julien Moukhtar , Alain Trubuil , Katia Belcram , David D. Legland , et al.
Plant Growth and Form: International Symposium on Quantitative Plant Morphodynamics, Sep 2019, Heidelberg, Germany
Conference papers hal-02786917v1

Model-based reconstruction of whole organ growth dynamics reveals invariant patterns in leaf morphogenesis

Mohamed Oughou , Eric Biot , Nicolas Arnaud , Aude Maugarny-Calès , Patrick Laufs , et al.
Quantitative Plant Biology, In press
Journal articles hal-03780169v1

De l’image numérique à la donnée scientifique: Qu’est-ce qu’une image numérique?

Marie Weiss , Marie Francoise M. F. Devaux , P. Andrey , David D. Legland
Ecole Image INRA: De l'image numérique à la donnée scientifique : quelles démarches d'analyse et de traitement d'images ?, 2014, Lyon, France
Conference papers hal-01336199v1

Large-scale analysis and computer modeling reveal hidden regularities behind variability of cell division patterns in Arabidopsis thaliana embryogenesis

Elise Laruelle , Katia Belcram , Alain Trubuil , Jean-Christophe Palauqui , Philippe Andrey
Preprints, Working Papers, ... hal-03766429v1

Spatiotemporal quantification of 3D cellular parameters during leaf morphogenesis

Faïçal Selka , Thomas T. Blein , Jasmine Burguet-de Curières , Eric Biot , Patrick Laufs , et al.
Quantitative BioImaging Conference, Jan 2019, Rennes, France
Conference papers hal-02786234v1