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Assessment of Common and Emerging Bioinformatics Pipelines for Targeted Metagenomics

Léa Siegwald , Hélène Touzet , Yves Lemoine , David Hot , Christophe Audebert , et al.
PLoS ONE, 2017, 12 (1), pp.e0169563. ⟨10.1371/journal.pone.0169563⟩
Journal articles hal-01575755v1
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Comparative assessment of long-read error correction software applied to Nanopore RNA-sequencing data

Leandro Lima , Camille Marchet , Ségolène Caboche , Corinne da Silva , Benjamin Istace , et al.
Briefings in Bioinformatics, 2019, pp.1-18. ⟨10.1093/bib/bbz058⟩
Journal articles hal-02394395v1
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Meta-analysis of the diagnostic performance of stress perfusion cardiovascular magnetic resonance for detection of coronary artery disease.

Michèle Hamon , Georges Fau , Guillaume Née , Javed Ehtisham , Rémy Morello , et al.
Journal of Cardiovascular Magnetic Resonance, 2010, 12 (1), pp.29. ⟨10.1186/1532-429X-12-29⟩
Journal articles inserm-00663744v1

Comparison of three molecular assays for detection of enteric viruses in stool samples

Haciba Moudjahed , Claire Pinçon , Kazali Alidjinou , Anny Dewilde , Anne Goffard
Journal of Virological Methods, 2017, 250, pp.55-58. ⟨10.1016/j.jviromet.2017.09.026⟩
Journal articles hal-02266805v1

SMMB: a stochastic Markov blanket framework strategy for epistasis detection in GWAS

Clément Niel , Christine Sinoquet , Christian Dina , Ghislain Rocheleau
Bioinformatics, 2018, 34 (16), pp.2773-2780. ⟨10.1093/bioinformatics/bty154⟩
Journal articles hal-01986668v1
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A complete protocol for whole-genome sequencing of virus from clinical samples: Application to coronavirus OC43

Florence Maurier , Delphine Beury , Léa Fléchon , Jean-Stéphane Varré , Hélène Touzet , et al.
Virology, 2019, 531, pp.141-148. ⟨10.1016/j.virol.2019.03.006⟩
Journal articles hal-02167880v1

A Vascular Endothelial Growth Factor-Dependent Sprouting Angiogenesis Assay Based on an In Vitro Human Blood Vessel Model for the Study of Anti-Angiogenic Drugs

Joris Pauty , Ryo Usuba , Irene Gayi Cheng , Louise Hespel , Haruko Takahashi , et al.
EBioMedicine, 2018, 27, pp.225-236. ⟨10.1016/j.ebiom.2017.12.014⟩
Journal articles hal-01716252v1
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Needle positioning in interventional MRI procedure: real time optical localisation and accordance with the roadmap.

Romain Viard , Nacim Betrouni , Jean Rousseau , Serge R. Mordon , Olivier Ernst , et al.
Conference proceedings : .. Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference, 2007, 1, pp.2748-51. ⟨10.1109/IEMBS.2007.4352897⟩
Journal articles inserm-00192867v1
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Transversal elasticity of TIEG1 KO muscle fibers probed by atomic force microscopy

Malek Kammoun , Vincent Dupres , Jessem Landoulsi , Malayannan Subramaniam , John Hawse , et al.
8th World Congress of Biomechanics, Jul 2018, Dublin, Ireland
Conference papers hal-01982831v1

Development of a novel multiphysical approach for the characterization of mechanical properties of musculotendinous tissues

Malek Kammoun , Redouane Ternifi , Vincent Dupres , Philippe Pouletaut , Sandra Même , et al.
Scientific Reports, 2019, 9 (1), ⟨10.1038/s41598-019-44053-1⟩
Journal articles hal-02139512v1

Association of vascular risk factors with cervical artery dissection and ischemic stroke in young adults.

Stéphanie Debette , Tiina Metso , Alessandro Pezzini , Shérine Abboud , Antti Metso , et al.
Circulation, 2011, 123 (14), pp.1537-1544. ⟨10.1161/CIRCULATIONAHA.110.000125⟩
Journal articles hal-00795721v1

Familial occurrence and heritable connective tissue disorders in cervical artery dissection.

Stéphanie Debette , Barbara Goeggel Simonetti , Sabrina Schilling , Juan José Martin , Manja Kloss , et al.
Neurology, 2014, 83 (22), pp.2023-2031. ⟨10.1212/WNL.0000000000001027⟩
Journal articles hal-01253338v1

Silencing of OB-RGRP in mouse hypothalamic arcuate nucleus increases leptin receptor signaling and prevents diet-induced obesity.

Cyril Couturier , Chamsy Sarkis , Karin Séron , Sandrine Belouzard , Patty Chen , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2007, 104 (49), pp.19476-81. ⟨10.1073/pnas.0706671104⟩
Journal articles inserm-00326136v1
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A tool to predict progression of non-alcoholic fatty liver disease in severely obese patients

Pierre Bauvin , Claire Delacôte , Guillaume Lassailly , Line Carolle Ntandja Wandji , Viviane Gnemmi , et al.
Liver International, 2020, 41 (1), pp.91-100. ⟨10.1111/liv.14650⟩
Journal articles hal-03012526v1

Transcriptome analysis of Yersinia pestis in human plasma: an approach for discovering bacterial genes involved in septicaemic plague

Sylvie Chauvaux , Marie-Laure Rosso , L. Frangeul , Céline Lacroix , Laurent Labarre , et al.
Microbiology, 2007, 153 (9), pp.3112-3124. ⟨10.1099/mic.0.2007/006213-0⟩
Journal articles pasteur-03252353v1

PASE: a web-based platform for peptide / protein microarray experiments

Fabien Pamelard , Gaël Even , Costin Apostol , Cristian Preda , Clarisse Dhaenens , et al.
M. Cretich. Peptide Microarrays, 570, Humana Press, pp.413-430, 2009, Methods in Molecular Biology
Book sections hal-00835040v1
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Use of a novel evolutionary algorithm for genomic selection

Julie Hamon , Gaël Even , Romain Dassonneville , Julien Jacques , Clarisse Dhaenens
Preprints, Working Papers, ... hal-01100660v1
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In silico-in vitro screening of protein-protein interactions: towards the next generation of therapeutics.

Bruno Villoutreix , Karine Bastard , Olivier Sperandio , Robin Fahraeus , Jean-Luc Poyet , et al.
Current Pharmaceutical Biotechnology, 2008, 9 (2), pp.103-122. ⟨10.2174/138920108783955218⟩
Journal articles inserm-00273685v1
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Recherche d'associations haplotypiques dans le cadre de la maladie d'Alzheimer

Jean-Charles Lambert , Benjamin Grenier-Boley
Rencontres Scientifiques France Grilles 2011, Sep 2011, Lyon, France
Conference papers hal-00652997v1

Common variation in PHACTR1 is associated with susceptibility to cervical artery dissection.

Stéphanie Debette , Yoichiro Kamatani , Tiina M Metso , Manja Kloss , Ganesh Chauhan , et al.
Nature Genetics, 2014, 47 (1), pp.78-83. ⟨10.1038/ng.3154⟩
Journal articles hal-01253336v1
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A survey about methods dedicated to epistasis detection

Clément Niel , Christine Sinoquet , Christian Dina , Ghislain Rocheleau
Frontiers in Genetics, 2015, 6 (Article 285), pp.19. ⟨10.3389/fgene.2015.00285⟩
Journal articles hal-01205577v1
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Use of whole-genome sequencing in the molecular investigation of care-associated HCoV-OC43 infections in a hematopoietic stem cell transplant unit

Delphine Beury , Léa Fléchon , Florence Maurier , Ségolène Caboche , Jean-Stéphane Varré , et al.
Journal of Clinical Virology, 2020, 122, pp.104206. ⟨10.1016/j.jcv.2019.104206⟩
Journal articles hal-02403094v1
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Association between IgM Anti-Herpes Simplex Virus and Plasma Amyloid-Beta Levels.

Catherine Féart , Catherine Helmer , Hervé Fleury , Yannick Béjot , Karen Ritchie , et al.
PLoS ONE, 2011, 6 (12), pp.e29480. ⟨10.1371/journal.pone.0029480⟩
Journal articles inserm-00657059v1

Multi-ancestry genome-wide gene–smoking interaction study of 387,272 individuals identifies new loci associated with serum lipids

Amy R. Bentley , Yun J. Sung , Michael R. Brown , Thomas W. Winkler , Aldi T. Kraja , et al.
Nature Genetics, 2019, 51 (4), pp.636-648. ⟨10.1038/s41588-019-0378-y⟩
Journal articles pasteur-03278554v1

Cervical artery dissection: trauma and other potential mechanical trigger events.

Stefan T Engelter , Caspar Grond-Ginsbach , Tiina M Metso , Antti J Metso , Manja Kloss , et al.
Neurology, 2013, 80 (21), pp.1950-7. ⟨10.1212/WNL.0b013e318293e2eb⟩
Journal articles hal-01253345v1